STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16300.1KEGG: sgg:SGGBAA2069_c01170 2.0e-10 CAAX amino protease-like K07052; Psort location: CytoplasmicMembrane, score: 10.00. (336 aa)    
Predicted Functional Partners:
KXA16301.1
KEGG: gvh:HMPREF9231_1243 2.3e-193 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase; Psort location: Cytoplasmic, score: 9.97.
  
    0.815
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
 
     0.736
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
     
 0.656
KXA16302.1
KEGG: gvh:HMPREF9231_1244 1.2e-164 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057; Psort location: Cytoplasmic, score: 7.50.
       0.564
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
     
 0.563
KXA15299.1
KEGG: gvh:HMPREF9231_0768 3.4e-192 IMP dehydrogenase family protein; K00088 IMP dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
     
 0.513
KXA17568.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.503
KXA16299.1
Homoserine dehydrogenase; KEGG: gvh:HMPREF9231_1241 1.8e-218 hom; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
       0.496
KXA16267.1
KEGG: gva:HMPREF0424_1309 2.8e-94 nitroreductase family protein; K00540; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.495
KXA16184.1
Nitroreductase family protein; KEGG: fna:OOM_0070 3.6e-21 nitroreductase; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.495
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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