STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16301.1KEGG: gvh:HMPREF9231_1243 2.3e-193 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase; Psort location: Cytoplasmic, score: 9.97. (381 aa)    
Predicted Functional Partners:
KXA17020.1
KEGG: gvh:HMPREF9231_1082 1.3e-224 murC; UDP-N-acetylmuramate--L-alanine ligase K01924; Psort location: Cytoplasmic, score: 7.50.
  
 0.993
KXA17025.1
KEGG: gvh:HMPREF9231_1087 5.0e-198 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929; Psort location: Cytoplasmic, score: 9.97.
  
 0.989
KXA17021.1
KEGG: gvh:HMPREF9231_1083 1.4e-177 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.948
KXA16084.1
KEGG: gvg:HMPREF0421_20329 2.6e-240 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.912
KXA17023.1
KEGG: gvg:HMPREF0421_20472 8.7e-233 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.906
KXA15207.1
Alanine racemase; KEGG: gvg:HMPREF0421_20911 4.2e-233 alr; alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.903
KXA16302.1
KEGG: gvh:HMPREF9231_1244 1.2e-164 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057; Psort location: Cytoplasmic, score: 7.50.
     
 0.891
KXA15668.1
KEGG: gvh:HMPREF9231_0227 1.6e-210 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain protein; K00075 UDP-N-acetylmuramate dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.888
KXA17024.1
KEGG: gvh:HMPREF9231_1086 2.5e-187 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.838
KXA16856.1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; KEGG: gvh:HMPREF9231_0354 2.2e-213 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K01928; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.826
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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