STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16261.1ABC transporter, permease protein; KEGG: rcu:RCOM_1803670 1.8e-44 L-arabinose transport system permease protein araP, putative; Psort location: CytoplasmicMembrane, score: 10.00. (329 aa)    
Predicted Functional Partners:
KXA16262.1
ABC transporter, permease protein; KEGG: tle:Tlet_0778 3.1e-61 monosaccharide-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 0.998
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.996
KXA16260.1
ABC transporter, solute-binding protein; KEGG: ebe:B21_03255 3.1e-19 ugpB; ugpB, subunit of glycerol-3-P ABC transporter K05813; Psort location: CytoplasmicMembrane, score: 9.68.
 0.992
KXA16273.1
ABC transporter, permease protein; KEGG: bst:GYO_3123 1.2e-29 L-arabinose transport system permease AraQ K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 0.970
KXA16279.1
KEGG: llk:LLKF_1844 4.0e-54 malG; maltose ABC transporter permease K10110; Psort location: CytoplasmicMembrane, score: 10.00.
0.925
KXA15101.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 4.1e-08 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: CytoplasmicMembrane, score: 9.51.
 
 0.888
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.811
KXA16263.1
Alpha amylase, catalytic domain protein; KEGG: gvg:HMPREF0421_20224 1.5e-260 nplT; neopullulanase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.804
KXA16281.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 1.1e-26 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: Extracellular, score: 9.13.
  
 0.795
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.794
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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