STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16265.1KEGG: gvh:HMPREF9231_0108 1.0e-261 DNA-binding helix-turn-helix protein; K14260 alanine-synthesizing transaminase; Psort location: Cytoplasmic, score: 7.50. (509 aa)    
Predicted Functional Partners:
KXA15262.1
Cof-like hydrolase; KEGG: bde:BDP_1141 3.7e-67 haloacid dehalogenase K07024; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.730
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.694
KXA15260.1
Triose-phosphate isomerase; KEGG: gvg:HMPREF0421_20768 1.5e-127 tpiA; triose-phosphate isomerase K01803; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.694
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.684
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.662
SecG
Preprotein translocase, SecG subunit; Psort location: CytoplasmicMembrane, score: 9.55.
       0.660
KXA16967.1
KEGG: gvh:HMPREF9231_1027 5.3e-162 L-lactate dehydrogenase K00016; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.604
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.590
KXA15186.1
KEGG: gvh:HMPREF9231_0908 1.4e-248 putative adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.586
KXA15152.1
Threonine synthase; KEGG: gvh:HMPREF9231_0704 1.2e-251 thrC; threonine synthase K01733; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.548
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.