KXA16268.1 protein (Gardnerella vaginalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KXA16268.1

KEGG: gvg:HMPREF0421_20231 6.7e-116 phosphoglycerate mutase K15634; Psort location: Cytoplasmic, score: 7.50. (281 aa)

Predicted Functional Partners:

KXA16949.1

0.879

KXA17194.1

0.666

KXA16267.1

0.663

Tal

0.609

Pgi

0.586

KXA16067.1

0.582

KXA17468.1

0.563

KXA15135.1

0.561

KXA16066.1

0.558

KXA16959.1

0.554

Your Current Organism:

Gardnerella vaginalis

NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KXA15135.1	KXA16066.1	HMPREF3204_01242	HMPREF3204_00864	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	0.550
KXA15135.1	KXA16067.1	HMPREF3204_01242	HMPREF3204_00865	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	0.456
KXA15135.1	KXA16267.1	HMPREF3204_01242	HMPREF3204_00595	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	KEGG: gva:HMPREF0424_1309 2.8e-94 nitroreductase family protein; K00540; Psort location: Cytoplasmic, score: 7.50.	0.415
KXA15135.1	KXA16268.1	HMPREF3204_01242	HMPREF3204_00596	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	KEGG: gvg:HMPREF0421_20231 6.7e-116 phosphoglycerate mutase K15634; Psort location: Cytoplasmic, score: 7.50.	0.561
KXA15135.1	KXA16949.1	HMPREF3204_01242	HMPREF3204_00237	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	Thymidylate synthase; KEGG: gvg:HMPREF0421_20547 8.6e-155 thyA; thymidylate synthase K00560; Psort location: Cytoplasmic, score: 9.97.	0.437
KXA15135.1	KXA17194.1	HMPREF3204_01242	HMPREF3204_00159	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	KEGG: gvg:HMPREF0421_20973 1.9e-141 gpm; phosphoglycerate mutase K01834; Psort location: Cytoplasmic, score: 7.50.	0.561
KXA15135.1	Pgi	HMPREF3204_01242	HMPREF3204_01013	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	KEGG: gvh:HMPREF9231_0314 0. glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.67.	0.781
KXA15135.1	Tal	HMPREF3204_01242	HMPREF3204_01184	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	Transaldolase; KEGG: gvg:HMPREF0421_20790 4.6e-188 tal; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.	0.639
KXA16066.1	KXA15135.1	HMPREF3204_00864	HMPREF3204_01242	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	0.550
KXA16066.1	KXA16067.1	HMPREF3204_00864	HMPREF3204_00865	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	0.994
KXA16066.1	KXA16268.1	HMPREF3204_00864	HMPREF3204_00596	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	KEGG: gvg:HMPREF0421_20231 6.7e-116 phosphoglycerate mutase K15634; Psort location: Cytoplasmic, score: 7.50.	0.558
KXA16066.1	KXA17468.1	HMPREF3204_00864	HMPREF3204_00088	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	KEGG: gvg:HMPREF0421_20299 2.0e-153 gnd; 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 7.50.	0.562
KXA16066.1	Pgi	HMPREF3204_00864	HMPREF3204_01013	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	KEGG: gvh:HMPREF9231_0314 0. glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.67.	0.587
KXA16066.1	Tal	HMPREF3204_00864	HMPREF3204_01184	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	Transaldolase; KEGG: gvg:HMPREF0421_20790 4.6e-188 tal; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.	0.724
KXA16067.1	KXA15135.1	HMPREF3204_00865	HMPREF3204_01242	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.	0.456
KXA16067.1	KXA16066.1	HMPREF3204_00865	HMPREF3204_00864	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.	0.994
KXA16067.1	KXA16268.1	HMPREF3204_00865	HMPREF3204_00596	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	KEGG: gvg:HMPREF0421_20231 6.7e-116 phosphoglycerate mutase K15634; Psort location: Cytoplasmic, score: 7.50.	0.582
KXA16067.1	KXA16959.1	HMPREF3204_00865	HMPREF3204_00247	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	KEGG: gvh:HMPREF9231_1017 2.0e-130 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.	0.899
KXA16067.1	KXA17468.1	HMPREF3204_00865	HMPREF3204_00088	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	KEGG: gvg:HMPREF0421_20299 2.0e-153 gnd; 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 7.50.	0.972
KXA16067.1	Pgi	HMPREF3204_00865	HMPREF3204_01013	KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.	KEGG: gvh:HMPREF9231_0314 0. glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.67.	0.986

page 1 of 4

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About