STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16274.1Hypothetical protein; KEGG: gvg:HMPREF0421_20236 2.3e-90 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00. (204 aa)    
Predicted Functional Partners:
KXA16273.1
ABC transporter, permease protein; KEGG: bst:GYO_3123 1.2e-29 L-arabinose transport system permease AraQ K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.883
KXA16271.1
ABC transporter, permease protein; KEGG: rcu:RCOM_1803670 4.0e-31 L-arabinose transport system permease protein araP, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.875
KXA16285.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.731
KXA16281.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 1.1e-26 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: Extracellular, score: 9.13.
 
  
 0.703
KXA16269.1
ABC transporter, solute-binding protein; KEGG: ebe:B21_03866 6.5e-10 malE; malE, subunit of maltose ABC transporter K10108.
 
  
 0.655
KXA16280.1
ABC transporter, permease protein; KEGG: cpy:Cphy_1880 1.6e-107 fructose-bisphosphate aldolase K10109; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.573
KXA16287.1
KEGG: gvh:HMPREF9231_1301 0. glycosyl hydrolase family protein.
 
    0.497
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
     
 0.416
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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