STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16278.1Pullulanase, type I; KEGG: gvh:HMPREF9231_1311 0. pulA_2; pullulanase. (665 aa)    
Predicted Functional Partners:
KXA16263.1
Alpha amylase, catalytic domain protein; KEGG: gvg:HMPREF0421_20224 1.5e-260 nplT; neopullulanase; Psort location: Cytoplasmic, score: 9.97.
  
 0.954
KXA17056.1
Alpha amylase, catalytic domain protein; KEGG: gvg:HMPREF0421_20579 2.4e-292 alpha-amylase K01176; Psort location: Extracellular, score: 9.72.
 
  
 0.935
KXA15217.1
Alpha amylase, catalytic domain protein; KEGG: gvg:HMPREF0421_20921 1.8e-280 neopullulanase 2; Psort location: Cytoplasmic, score: 9.97.
  
 0.884
KXA16280.1
ABC transporter, permease protein; KEGG: cpy:Cphy_1880 1.6e-107 fructose-bisphosphate aldolase K10109; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.876
KXA16279.1
KEGG: llk:LLKF_1844 4.0e-54 malG; maltose ABC transporter permease K10110; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.832
KXA16651.1
KEGG: gvh:HMPREF9231_0586 0. glgB; 1,4-alpha-glucan-branching protein K00700.
 
  
 0.790
KXA16277.1
Hypothetical protein.
       0.773
KXA16281.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 1.1e-26 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: Extracellular, score: 9.13.
 
 
 0.709
GlgP
Putative glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
  
 0.675
KXA16176.1
Alpha amylase, catalytic domain protein; KEGG: gvh:HMPREF9231_0082 0. malL_1; oligo-1,6-glucosidase 1 K01182; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.661
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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