STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16285.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (257 aa)    
Predicted Functional Partners:
KXA16280.1
ABC transporter, permease protein; KEGG: cpy:Cphy_1880 1.6e-107 fructose-bisphosphate aldolase K10109; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.814
KXA16279.1
KEGG: llk:LLKF_1844 4.0e-54 malG; maltose ABC transporter permease K10110; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.795
KXA16274.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20236 2.3e-90 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.731
KXA16275.1
4-alpha-glucanotransferase; KEGG: gvg:HMPREF0421_20237 0. malQ; 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
       0.600
KXA16281.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 1.1e-26 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: Extracellular, score: 9.13.
 
     0.580
KXA16284.1
Alpha amylase, catalytic domain protein; KEGG: gvg:HMPREF0421_20243 0. putative oligo-1,6-glucosidase K05343; Psort location: Cytoplasmic, score: 9.67.
       0.520
KXA16079.1
GtrA-like protein; KEGG: dly:Dehly_0597 0.00040 dolichyl-phosphate beta-D-mannosyltransferase K00721; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.509
KXA16278.1
Pullulanase, type I; KEGG: gvh:HMPREF9231_1311 0. pulA_2; pullulanase.
       0.442
KXA16083.1
Ser/Thr phosphatase family protein; KEGG: afm:AFUA_4G12720 0.0056 phosphoesterase K01175; Psort location: Cytoplasmic, score: 7.50.
 
     0.412
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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