STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DnaKChaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97. (632 aa)    
Predicted Functional Partners:
KXA16236.1
KEGG: rsl:RPSI07_0878 3.6e-14 grpE; Hsp 24 nucleotide exchange factor, Ribulose-phosphate 3-epimerase activity K03687; Psort location: Cytoplasmic, score: 7.50.
 
 0.999
KXA16237.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.2e-36 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
 0.999
KXA15288.1
KEGG: apb:SAR116_1614 6.9e-50 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
 0.999
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 0.992
ClpB
KEGG: bde:BDP_1996 0. clpB; ATP-dependent chaperone ClpB K03695; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.974
KXA15168.1
Hemolysin B; KEGG: crd:CRES_0206 4.6e-298 clpC; ATP-dependent Clp protease ATP-binding subunit K03696; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.974
GroS
Chaperonin GroS; KEGG: apb:SAR116_1896 8.4e-22 chaperonin Cpn10 K04078; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.962
KXA16238.1
Heat shock protein HspR family protein; KEGG: pfe:PSF113_2023 0.0045 MerR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.961
KXA16965.1
SUF system FeS assembly protein, NifU family; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.946
RplP
Ribosomal protein L16; KEGG: apb:SAR116_2398 2.0e-36 50S ribosomal protein L16 K02878; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.943
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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