STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16238.1Heat shock protein HspR family protein; KEGG: pfe:PSF113_2023 0.0045 MerR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97. (202 aa)    
Predicted Functional Partners:
KXA16237.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.2e-36 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.979
DnaK
Chaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.961
KXA16236.1
KEGG: rsl:RPSI07_0878 3.6e-14 grpE; Hsp 24 nucleotide exchange factor, Ribulose-phosphate 3-epimerase activity K03687; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.961
KXA15288.1
KEGG: apb:SAR116_1614 6.9e-50 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.916
RpoD
RNA polymerase sigma factor RpoD; KEGG: lru:HMPREF0538_21998 4.6e-92 rpoD; DNA-directed RNA polymerase sigma subunit RpoD K03086; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.824
KXA16239.1
HAD hydrolase, family IA, variant 3; KEGG: bde:BDP_2175 1.9e-70 haloacid dehalogenase; Psort location: Cytoplasmic, score: 7.50.
     
 0.818
KXA15287.1
Transcription repressor HrcA; KEGG: apb:SAR116_1619 9.4e-30 transcriptional regulator of heat shock gene K03705; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.796
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.766
rpoZ
KEGG: gvg:HMPREF0421_20761 2.2e-46 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
 
 
 
 0.743
RpoA
KEGG: gvh:HMPREF9231_0263 6.9e-169 rpoA; DNA-directed RNA polymerase subunit alpha K03040; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.708
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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