STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16239.1HAD hydrolase, family IA, variant 3; KEGG: bde:BDP_2175 1.9e-70 haloacid dehalogenase; Psort location: Cytoplasmic, score: 7.50. (252 aa)    
Predicted Functional Partners:
KXA16237.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.2e-36 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.818
KXA16238.1
Heat shock protein HspR family protein; KEGG: pfe:PSF113_2023 0.0045 MerR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
     
 0.818
KXA15371.1
Methyltransferase domain protein; KEGG: gvg:HMPREF0421_20741 2.8e-188 tRNA (adenine-N(1)-)-methyltransferase K07442; Psort location: Cytoplasmic, score: 7.50.
      0.794
KXA17597.1
HAD hydrolase, family IA, variant 3; KEGG: bnm:BALAC2494_00389 1.7e-39 thiamine-phosphate diphosphorylase; Psort location: Cytoplasmic, score: 7.50.
  
     0.772
DnaK
Chaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.772
KXA16236.1
KEGG: rsl:RPSI07_0878 3.6e-14 grpE; Hsp 24 nucleotide exchange factor, Ribulose-phosphate 3-epimerase activity K03687; Psort location: Cytoplasmic, score: 7.50.
     
 0.739
KXA16086.1
SNARE-like domain protein; KEGG: bqy:MUS_0230 4.6e-14 ybfM; alkaline phosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.699
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.675
KXA16252.1
Phosphomethylpyrimidine kinase; KEGG: gvg:HMPREF0421_20209 1.7e-298 theD; phosphomethylpyrimidine kinase K00941; Psort location: Cytoplasmic, score: 7.50.
 
     0.665
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.524
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.