STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16240.1Transglycosylase; KEGG: bbp:BBPR_1743 4.8e-216 pbp2; penicillin-binding protein Pbp; Psort location: CytoplasmicMembrane, score: 9.99. (700 aa)    
Predicted Functional Partners:
KXA17027.1
KEGG: gvh:HMPREF9231_1089 1.0e-293 penicillin-binding protein, transpeptidase domain protein; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.51.
 
 
 
 0.863
KXA15914.1
KEGG: gvg:HMPREF0421_20139 7.5e-227 pbpA; penicillin binding protein transpeptidase domain-containing protein K05364; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.857
KXA16242.1
KEGG: gvg:HMPREF0421_20264 3.2e-196 1L-myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase; Psort location: Cytoplasmic, score: 7.50.
       0.776
KXA17024.1
KEGG: gvh:HMPREF9231_1086 2.5e-187 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.746
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
     
 0.704
KXA17022.1
KEGG: kfl:Kfla_2886 8.3e-54 cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.698
KXA16694.1
KEGG: gvg:HMPREF0421_20438 2.1e-215 D-Ala-D-Ala carboxypeptidase 3 (S13) domain-containing protein; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Extracellular, score: 9.72.
 
   
 0.693
KXA16448.1
Ribosomal protein L9; KEGG: apb:SAR116_0644 3.0e-17 50S ribosomal protein L9 K02939; Psort location: Cytoplasmic, score: 9.97.
  
    0.666
KXA16197.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20267 4.1e-139 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.662
KXA17021.1
KEGG: gvh:HMPREF9231_1083 1.4e-177 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.658
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.