STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16197.1Hypothetical protein; KEGG: gvg:HMPREF0421_20267 4.1e-139 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00. (413 aa)    
Predicted Functional Partners:
KXA15698.1
Ribosomal protein L6; KEGG: ccv:CCV52592_1018 3.3e-34 rplF; 50S ribosomal protein L6 K02933; Psort location: Cytoplasmic, score: 7.50.
   
 0.896
KXA16658.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20995 7.2e-261 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.807
KXA16021.1
ATP synthase F0, C subunit; KEGG: gvh:HMPREF9231_0134 3.8e-33 atpE; ATP synthase F0 subunit C K02110; Psort location: CytoplasmicMembrane, score: 9.55.
   
 0.763
KXA15660.1
Hypothetical protein; KEGG: cnc:CNE_1c17080 5.7e-09 uvrD1; DNA helicase; Psort location: Cytoplasmic, score: 7.50.
  
     0.760
KXA17000.1
Hypothetical protein; KEGG: ddi:DDB_G0282959 1.1e-08 P-type ATPase; K01530 phospholipid-translocating ATPase.
 
 
 
 0.759
KXA16017.1
Hypothetical protein; KEGG: ddi:DDB_G0292358 1.2e-12 ino80; CHR group protein; K11665 DNA helicase INO80; Psort location: Cytoplasmic, score: 9.64.
  
     0.759
KXA16201.1
KEGG: gvh:HMPREF9231_1282 1.2e-185 putative DNA polymerase III, delta' subunit; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
 
    0.753
KXA16004.1
Hypothetical protein; KEGG: bbp:BBPR_1681 2.7e-55 pyrE1; orotate phosphoribosyltransferase PyrE; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.753
KXA16018.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.753
KXA15528.1
Hypothetical protein; KEGG: ddi:DDB_G0268430 2.6e-06 hypothetical protein; K15255 ATP-dependent DNA helicase PIF1.
 
  
 0.744
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.