STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16205.1Hypothetical protein; KEGG: gvg:HMPREF0421_20279 8.1e-143 aes; endo-1,4-beta-xylanase; Psort location: Cytoplasmic, score: 7.50. (280 aa)    
Predicted Functional Partners:
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.696
KXA17249.1
Peptidase family M13; KEGG: gvh:HMPREF9231_0636 0. peptidase family M13 K07386; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.672
KXA16206.1
KEGG: gvh:HMPREF9231_1276 6.7e-139 S-adenosylmethionine-dependent methyltransferase, YraL family; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.652
KXA15701.1
Ribosomal protein L30; Psort location: Cytoplasmic, score: 9.67.
    
 0.636
DnaK
Chaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.623
KXA15618.1
Ribonuclease HII; KEGG: gvg:HMPREF0421_21216 1.6e-98 rnhB; ribonuclease HII K03470.
  
   0.583
KXA15622.1
Thioredoxin; KEGG: gvg:HMPREF0421_20416 5.1e-54 trxA; thioredoxin; Psort location: Cytoplasmic, score: 9.67.
   
 
 0.583
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.576
KXA16237.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.2e-36 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.564
KXA15288.1
KEGG: apb:SAR116_1614 6.9e-50 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.564
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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