STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16206.1KEGG: gvh:HMPREF9231_1276 6.7e-139 S-adenosylmethionine-dependent methyltransferase, YraL family; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 7.50. (301 aa)    
Predicted Functional Partners:
KXA16210.1
methionine--tRNA ligase; KEGG: gvg:HMPREF0421_20283 0. metG; methionine--tRNA ligase K01874; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.769
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.732
KXA16178.1
Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: gvg:HMPREF0421_20196 2.4e-70 fca1; putative cytosine deaminase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.727
KXA17029.1
KEGG: gvh:HMPREF9231_1091 7.9e-152 mraW; S-adenosyl-methyltransferase MraW K03438; Psort location: Cytoplasmic, score: 9.97.
     
 0.720
KXA15944.1
KEGG: gvh:HMPREF9231_1395 2.3e-129 ksgA; dimethyladenosine transferase K02528; Psort location: Cytoplasmic, score: 9.97.
     
 0.715
KXA17036.1
KEGG: apb:SAR116_2228 1.5e-13 transcription elongation factor K03624; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.706
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
       0.692
KXA17462.1
Hydrolase, TatD family; KEGG: gvh:HMPREF9231_1264 3.7e-170 TatD family hydrolase; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.682
KXA15207.1
Alanine racemase; KEGG: gvg:HMPREF0421_20911 4.2e-233 alr; alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97.
 
   0.666
KXA16205.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20279 8.1e-143 aes; endo-1,4-beta-xylanase; Psort location: Cytoplasmic, score: 7.50.
       0.652
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.