STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16177.1KEGG: gvh:HMPREF9231_0081 1.2e-171 2-dehydropantoate 2-reductase K00077; Psort location: Cytoplasmic, score: 7.50. (322 aa)    
Predicted Functional Partners:
KXA15535.1
NLPA lipoprotein; KEGG: pfe:PSF113_0025 2.1e-57 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 9.51.
  
    0.725
KXA15534.1
KEGG: gvg:HMPREF0421_20629 2.6e-121 ABC transporter ATP-binding protein K02071; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.701
KXA15533.1
KEGG: pfe:PSF113_0026 5.0e-47 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.689
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.654
AspS
aspartate--tRNA ligase; KEGG: gvg:HMPREF0421_20832 0. aspS; aspartate--tRNA ligase K01876; Psort location: Cytoplasmic, score: 10.00.
       0.639
KXA17062.1
Cobalt transport protein; KEGG: sap:Sulac_1647 1.3e-12 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
       0.636
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.596
KXA16697.1
KEGG: gvh:HMPREF9231_1113 0. hflB; ATP-dependent metallopeptidase HflB K03798; Psort location: CytoplasmicMembrane, score: 9.99.
       0.588
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.565
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
       0.517
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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