STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16178.1Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: gvg:HMPREF0421_20196 2.4e-70 fca1; putative cytosine deaminase; Psort location: Cytoplasmic, score: 9.97. (154 aa)    
Predicted Functional Partners:
KXA16643.1
KEGG: gvg:HMPREF0421_21079 2.1e-144 xthA; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.907
KXA15177.1
uracil-DNA glycosylase; KEGG: gvg:HMPREF0421_20654 6.4e-111 ung; uracil-DNA glycosylase K03648; Psort location: Cytoplasmic, score: 9.67.
 
 
 0.898
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.851
KXA16179.1
Phospholipase/carboxylesterase; KEGG: gvh:HMPREF9231_0073 3.0e-136 phospholipase/carboxylesterase K06999; Psort location: Cytoplasmic, score: 7.50.
       0.785
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
     
 0.766
FusA
Translation elongation factor G; KEGG: bnm:BALAC2494_00509 0. Protein-synthesizing GTPase K02355; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.757
Upp
KEGG: gvg:HMPREF0421_20089 1.5e-109 upp; uracil phosphoribosyltransferase K00761; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.740
KXA16206.1
KEGG: gvh:HMPREF9231_1276 6.7e-139 S-adenosylmethionine-dependent methyltransferase, YraL family; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.727
KXA16186.1
KEGG: gvh:HMPREF9231_0066 6.9e-240 tgt; tRNA-guanine transglycosylase K00773; Psort location: Cytoplasmic, score: 7.50.
     
 0.712
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
  
    0.706
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.