STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16185.1Trypsin; KEGG: gvg:HMPREF0421_20188 6.7e-258 htrA; serine protease HtrA K08372. (621 aa)    
Predicted Functional Partners:
KXA17529.1
alanine--tRNA ligase; KEGG: gvh:HMPREF9231_0443 0. alaS; alanine--tRNA ligase K01872; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.897
KXA15202.1
Acetolactate synthase; KEGG: gvg:HMPREF0421_20896 7.8e-296 alsS; acetolactate synthase K01652; Psort location: Cytoplasmic, score: 9.97.
    
 0.885
KXA16186.1
KEGG: gvh:HMPREF9231_0066 6.9e-240 tgt; tRNA-guanine transglycosylase K00773; Psort location: Cytoplasmic, score: 7.50.
       0.810
KXA16184.1
Nitroreductase family protein; KEGG: fna:OOM_0070 3.6e-21 nitroreductase; Psort location: CytoplasmicMembrane, score: 9.55.
     
 0.805
KXA15414.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: gvg:HMPREF0421_20694 3.3e-137 fabG; 3-oxoacyl-ACP reductase K00059; Psort location: Cytoplasmic, score: 9.97.
  
 0.794
KXA15171.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gva:HMPREF0424_0721 2.0e-226 sensor histidine kinase/response regulator; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.775
KXA16444.1
Ribosomal protein S6; KEGG: apb:SAR116_0642 8.8e-11 30S ribosomal protein S6 K02990; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.763
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.749
KXA16448.1
Ribosomal protein L9; KEGG: apb:SAR116_0644 3.0e-17 50S ribosomal protein L9 K02939; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.742
KXA15424.1
Putative prolyl aminopeptidase; KEGG: gvg:HMPREF0421_20703 7.1e-254 pap; prolyl aminopeptidase; Psort location: Cytoplasmic, score: 9.67.
   
 0.733
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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