STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15873.1Transcriptional regulator, GntR family; KEGG: ecf:ECH74115_0120 7.9e-08 pdhR; transcriptional regulator PdhR K05799; Psort location: Cytoplasmic, score: 7.50. (263 aa)    
Predicted Functional Partners:
KXA15872.1
BNR/Asp-box repeat protein; KEGG: gvg:HMPREF0421_20186 0. sialidase A; Psort location: Extracellular, score: 8.19.
 
   
 0.860
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.761
KXA17465.1
FCD domain protein; KEGG: pfe:PSF113_3206 4.4e-05 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.667
KXA15880.1
ABC transporter, substrate-binding protein, family 5; KEGG: ckl:CKL_1049 1.1e-37 oppA1; OppA1 K02035; Psort location: Cellwall, score: 9.21.
 
   
 0.663
KXA15199.1
UbiC transcription regulator-associated domain protein; KEGG: reh:H16_B1289 3.6e-14 phnF; phosphonate operon transcriptional regulator K02043; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.625
KXA15876.1
Dihydrodipicolinate synthetase family protein; KEGG: gvh:HMPREF9231_0059 5.9e-163 dihydrodipicolinate synthase K01714; Psort location: Cytoplasmic, score: 9.67.
 
   
 0.604
KXA15883.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.519
KXA17130.1
BNR/Asp-box repeat protein; KEGG: bbp:BBPR_1794 9.0e-144 exo-alpha-sialidase K01186; Psort location: Extracellular, score: 9.98.
 
   
 0.513
KXA17467.1
Transporter, gluconate:H+ symporter family; KEGG: ebe:B21_04152 4.1e-68 gntP; GntP Gluconate Gnt transporter K03299; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.505
KXA15874.1
KEGG: gvh:HMPREF9231_0061 1.1e-209 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 7.50.
     
 0.500
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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