STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15877.1KEGG: gvg:HMPREF0421_20179 2.4e-143 ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.96. (286 aa)    
Predicted Functional Partners:
KXA15879.1
ABC transporter, permease protein; KEGG: tle:Tlet_0072 8.1e-56 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.972
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.971
KXA17008.1
Putative dipeptide transport system permease protein DppC; KEGG: apb:SAR116_0601 5.1e-38 binding-protein-dependent transport system inner membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.966
KXA17455.1
Putative oligopeptide transport system permease protein OppC; KEGG: bra:BRADO1095 1.8e-35 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.964
KXA15211.1
KEGG: bra:BRADO2619 4.6e-37 ABC transporter permease K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.964
KXA16665.1
Putative oligopeptide ABC transporter, permease protein OppC; KEGG: bra:BRADO1095 2.1e-41 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.952
KXA15880.1
ABC transporter, substrate-binding protein, family 5; KEGG: ckl:CKL_1049 1.1e-37 oppA1; OppA1 K02035; Psort location: Cellwall, score: 9.21.
 
 
 0.928
KXA15876.1
Dihydrodipicolinate synthetase family protein; KEGG: gvh:HMPREF9231_0059 5.9e-163 dihydrodipicolinate synthase K01714; Psort location: Cytoplasmic, score: 9.67.
   
 0.839
KXA17504.1
KEGG: pva:Pvag_1909 1.0e-48 ABC transporter permease K02029; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.801
KXA17460.1
KEGG: bde:BDP_2113 2.5e-228 ABC transporter ATP-binding protein/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.
   
0.786
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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