STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15881.1Putative N-acetylmannosamine-6-P epimerase; KEGG: gvh:HMPREF9231_0054 9.2e-119 thiazole biosynthesis protein ThiG-like protein; K01788 N-acylglucosamine-6-phosphate 2-epimerase; Psort location: Cytoplasmic, score: 7.50. (222 aa)    
Predicted Functional Partners:
KXA15882.1
ROK family protein; KEGG: gvg:HMPREF0421_20174 6.7e-155 glcK; putative glucokinase K00845; Psort location: Cytoplasmic, score: 9.97.
 
 0.993
KXA15875.1
KEGG: gvh:HMPREF9231_0060 8.0e-136 nagB; glucosamine-6-phosphate deaminase K02564; Psort location: Cytoplasmic, score: 7.50.
     
 0.899
KXA15874.1
KEGG: gvh:HMPREF9231_0061 1.1e-209 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 7.50.
    
 0.869
KXA15883.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.819
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.770
KXA15876.1
Dihydrodipicolinate synthetase family protein; KEGG: gvh:HMPREF9231_0059 5.9e-163 dihydrodipicolinate synthase K01714; Psort location: Cytoplasmic, score: 9.67.
 
  
 0.768
KXA15411.1
KEGG: gvh:HMPREF9231_0874 6.0e-154 dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.654
KXA15880.1
ABC transporter, substrate-binding protein, family 5; KEGG: ckl:CKL_1049 1.1e-37 oppA1; OppA1 K02035; Psort location: Cellwall, score: 9.21.
     
 0.635
KXA15257.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.535
KXA17130.1
BNR/Asp-box repeat protein; KEGG: bbp:BBPR_1794 9.0e-144 exo-alpha-sialidase K01186; Psort location: Extracellular, score: 9.98.
     
 0.501
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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