STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15883.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (310 aa)    
Predicted Functional Partners:
KXA16643.1
KEGG: gvg:HMPREF0421_21079 2.1e-144 xthA; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.876
KXA15882.1
ROK family protein; KEGG: gvg:HMPREF0421_20174 6.7e-155 glcK; putative glucokinase K00845; Psort location: Cytoplasmic, score: 9.97.
       0.866
KXA16072.1
Endonuclease III; KEGG: gvh:HMPREF9231_0200 2.3e-90 nth; endonuclease III K10773.
  
 
 0.843
KXA15881.1
Putative N-acetylmannosamine-6-P epimerase; KEGG: gvh:HMPREF9231_0054 9.2e-119 thiazole biosynthesis protein ThiG-like protein; K01788 N-acylglucosamine-6-phosphate 2-epimerase; Psort location: Cytoplasmic, score: 7.50.
 
     0.819
KXA15880.1
ABC transporter, substrate-binding protein, family 5; KEGG: ckl:CKL_1049 1.1e-37 oppA1; OppA1 K02035; Psort location: Cellwall, score: 9.21.
 
     0.766
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.750
KXA15872.1
BNR/Asp-box repeat protein; KEGG: gvg:HMPREF0421_20186 0. sialidase A; Psort location: Extracellular, score: 8.19.
 
     0.736
KXA15177.1
uracil-DNA glycosylase; KEGG: gvg:HMPREF0421_20654 6.4e-111 ung; uracil-DNA glycosylase K03648; Psort location: Cytoplasmic, score: 9.67.
   
 
 0.719
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
       0.676
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
       0.666
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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