STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15890.1KEGG: gvh:HMPREF9231_0038 0. heavy metal translocating P-type ATPase; Psort location: CytoplasmicMembrane, score: 10.00. (795 aa)    
Predicted Functional Partners:
KXA15889.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: gvh:HMPREF9231_0039 9.7e-234 putative NADPH-ferredoxin reductase FprA; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.829
KXA16185.1
Trypsin; KEGG: gvg:HMPREF0421_20188 6.7e-258 htrA; serine protease HtrA K08372.
     
 0.708
KXA15888.1
Peptidase, M48 family; KEGG: gvg:HMPREF0421_20164 6.9e-114 htpX; heat shock protein HtpX K03799; Psort location: CytoplasmicMembrane, score: 8.16.
 
   
 0.698
KXA16186.1
KEGG: gvh:HMPREF9231_0066 6.9e-240 tgt; tRNA-guanine transglycosylase K00773; Psort location: Cytoplasmic, score: 7.50.
       0.681
KXA16181.1
Putative calcium-translocating P-type ATPase, PMCA-type; KEGG: gvg:HMPREF0421_20193 0. atp2C1; putative calcium-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.599
DnaK
Chaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.537
KXA16653.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bde:BDP_0891 5.1e-125 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.515
KXA16648.1
Cation diffusion facilitator family transporter; KEGG: eci:UTI89_C0749 7.7e-35 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.462
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.443
KXA16692.1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA family protein; KEGG: bde:BDP_0544 1.8e-99 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.441
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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