STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15895.1Ferritin-like protein; KEGG: gvg:HMPREF0421_20160 7.6e-76 DNA protection during starvation protein K04047; Psort location: Cytoplasmic, score: 9.97. (163 aa)    
Predicted Functional Partners:
KXA15896.1
Hypothetical protein; KEGG: hpa:HPAG1_1423 1.1e-49 hemolysin domain-containing protein K00088; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.893
KXA15300.1
Peroxiredoxin; KEGG: gvg:HMPREF0421_20840 8.8e-98 ahpC; peroxiredoxin K03386; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.737
KXA15157.1
KEGG: gvh:HMPREF9231_0699 9.2e-87 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.643
KXA15156.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 9.7e-05 fadD; long-chain-fatty-acid--CoA ligase K03743.
       0.639
KXA15158.1
FtsK/SpoIIIE family protein; KEGG: eab:ECABU_c09310 2.0e-100 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.621
KXA15899.1
Carbonate dehydratase; KEGG: gvh:HMPREF9231_0030 6.3e-104 cah; carbonate dehydratase K01673; Psort location: Cytoplasmic, score: 9.97.
       0.620
KXA16662.1
Transcription factor WhiB.
     
 0.607
KXA15301.1
KEGG: gvh:HMPREF9231_0734 6.8e-249 ahpF; alkyl hydroperoxide reductase K03387; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.603
KXA15897.1
TIGR03943 family protein; Psort location: CytoplasmicMembrane, score: 9.35.
       0.574
KXA15898.1
Putative permease; Psort location: CytoplasmicMembrane, score: 10.00.
       0.574
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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