STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlgPPutative glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (827 aa)    
Predicted Functional Partners:
Pgm
KEGG: gva:HMPREF0424_0298 3.9e-301 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.982
KXA16651.1
KEGG: gvh:HMPREF9231_0586 0. glgB; 1,4-alpha-glucan-branching protein K00700.
 
 
 0.981
KXA16263.1
Alpha amylase, catalytic domain protein; KEGG: gvg:HMPREF0421_20224 1.5e-260 nplT; neopullulanase; Psort location: Cytoplasmic, score: 9.97.
  
 0.966
KXA16275.1
4-alpha-glucanotransferase; KEGG: gvg:HMPREF0421_20237 0. malQ; 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.831
KXA15678.1
4-alpha-glucanotransferase; KEGG: gvg:HMPREF0421_21288 0. malQ2; 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.831
KXA15904.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.825
KXA17066.1
KEGG: gvh:HMPREF9231_0984 0. glgX; glycogen debranching protein GlgX K02438; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.751
KXA16951.1
KEGG: gvh:HMPREF9231_1010 4.5e-197 glycosyltransferase, group 1 family protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.751
Pgi
KEGG: gvh:HMPREF9231_0314 0. glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.680
KXA16284.1
Alpha amylase, catalytic domain protein; KEGG: gvg:HMPREF0421_20243 0. putative oligo-1,6-glucosidase K05343; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.676
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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