STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15919.1PAP2 family protein; KEGG: sgg:SGGBAA2069_c17470 5.8e-14 PAP2 superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. (232 aa)    
Predicted Functional Partners:
KXA15698.1
Ribosomal protein L6; KEGG: ccv:CCV52592_1018 3.3e-34 rplF; 50S ribosomal protein L6 K02933; Psort location: Cytoplasmic, score: 7.50.
   
 0.896
KXA16021.1
ATP synthase F0, C subunit; KEGG: gvh:HMPREF9231_0134 3.8e-33 atpE; ATP synthase F0 subunit C K02110; Psort location: CytoplasmicMembrane, score: 9.55.
   
 0.766
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.716
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.705
KXA15305.1
KEGG: ccm:Ccan_01720 2.5e-45 protein mrp-like protein K03593.
  
  
 0.673
KXA16199.1
DNA topoisomerase I; KEGG: gvh:HMPREF9231_1284 0. topA; DNA topoisomerase I K03168; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.661
KXA15920.1
Large conductance mechanosensitive channel protein; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.645
rpoZ
KEGG: gvg:HMPREF0421_20761 2.2e-46 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
   
 
 0.637
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
     
 0.628
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
       0.606
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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