STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15941.1tRNA adenylyltransferase; KEGG: gvg:HMPREF0421_20113 2.9e-250 pcnA; RNA nucleotidyltransferase; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 7.50. (495 aa)    
Predicted Functional Partners:
KXA16091.1
Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; KEGG: gvg:HMPREF0421_20335 0. pnp; polyribonucleotide nucleotidyltransferase K00962; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.866
KXA16865.1
Phosphoglucosamine mutase; KEGG: gvg:HMPREF0421_20430 2.6e-240 glmM; phosphoglucosamine mutase K03431; Psort location: Cytoplasmic, score: 7.50.
    
 0.864
KXA15942.1
Hydrolase, NUDIX family; KEGG: bde:BDP_2267 1.6e-80 phosphohydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.837
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.836
KXA15940.1
Hypothetical protein; KEGG: spo:SPAPB1E7.04c 4.9e-05 chitinase (predicted) K01183.
       0.792
KXA15939.1
Putative integral membrane protein MviN; KEGG: pfe:PSF113_5043 2.7e-13 murJ; protein MurJ K03980; Psort location: CytoplasmicMembrane, score: 10.00.
       0.782
KXA15937.1
KEGG: gvh:HMPREF9231_1402 2.7e-142 trxB; thioredoxin-disulfide reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.764
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.731
KXA17253.1
Oligoribonuclease; KEGG: gvh:HMPREF9231_0631 8.6e-123 orn; oligoribonuclease K13288; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.714
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.710
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.