STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15944.1KEGG: gvh:HMPREF9231_1395 2.3e-129 ksgA; dimethyladenosine transferase K02528; Psort location: Cytoplasmic, score: 9.97. (296 aa)    
Predicted Functional Partners:
RpsD
Ribosomal protein S4; KEGG: ctu:CTU_38240 1.2e-27 rpsD; 30S ribosomal protein S4 K02986; Psort location: Cytoplasmic, score: 7.50.
  
 0.978
KXA15690.1
Ribosomal protein S3; KEGG: apb:SAR116_2397 5.1e-54 30S ribosomal protein S3 K02982; Psort location: Cytoplasmic, score: 9.97.
  
 0.971
KXA15331.1
Ribosomal protein S2; KEGG: apb:SAR116_0519 6.5e-54 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97.
 
 0.952
RpsG
Ribosomal protein S7; KEGG: apb:SAR116_2387 2.0e-45 30S ribosomal protein S7 K02992.
  
 0.949
KXA15683.1
Ribosomal protein S10; KEGG: apb:SAR116_2390 6.0e-28 30S ribosomal protein S10 K02946; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.947
KXA16089.1
Ribosomal protein S15; KEGG: apb:SAR116_1577 1.1e-19 30S ribosomal protein S15 K02956; Psort location: Cytoplasmic, score: 9.67.
  
 0.945
RpsH
Ribosomal protein S8; KEGG: apb:SAR116_2405 5.5e-25 30S ribosomal protein S8 K02994; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.945
KXA15693.1
KEGG: apb:SAR116_2400 7.9e-10 30S ribosomal protein S17 K02961; Psort location: Cytoplasmic, score: 9.97.
  
 0.944
RpsL
Ribosomal protein S12; KEGG: apb:SAR116_2386 2.0e-45 30S ribosomal protein S12 K02950; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.943
KXA15700.1
Ribosomal protein S5; KEGG: apb:SAR116_2408 1.1e-35 30S ribosomal protein S5 K02988; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.942
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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