Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXA15954.1MATE efflux family protein; KEGG: pfe:PSF113_0668 9.3e-23 DNA-damage-inducible protein F K03327; Psort location: CytoplasmicMembrane, score: 10.00. (451 aa)    
Predicted Functional Partners:
KXA15955.1
Replicative DNA helicase; KEGG: gvg:HMPREF0421_20092 5.1e-244 dnaB; replicative DNA helicase DnaB K02314; Psort location: Cytoplasmic, score: 7.50.
     
 0.765
KXA16199.1
DNA topoisomerase I; KEGG: gvh:HMPREF9231_1284 0. topA; DNA topoisomerase I K03168; Psort location: Cytoplasmic, score: 9.67.
     
 0.676
KXA15716.1
Ribosome-binding factor A; KEGG: aly:ARALYDRAFT_353351 8.0e-06 hypothetical protein; K00764 amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97.
     
 0.667
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
     
 0.644
KXA15956.1
Mur ligase middle domain protein; KEGG: bbb:BIF_00786 2.9e-131 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Psort location: Cytoplasmic, score: 7.50.
     
 0.635
KXA15715.1
KEGG: bbp:BBPR_1522 0. infB; protein translation initiation factor 2 (IF-2) InfB K02519; Psort location: Cytoplasmic, score: 9.67.
     
 0.628
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.597
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.596
KXA15718.1
Riboflavin kinase; KEGG: gvg:HMPREF0421_20346 6.3e-191 ribF; riboflavin kinase/FMN adenylyltransferase K11753; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.594
KXA15702.1
Ribosomal protein L15; KEGG: apb:SAR116_2410 9.9e-19 50S ribosomal protein L15 K02876.
   
   0.592
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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