STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15959.1Toxin-antitoxin system, antitoxin component, HicB family. (140 aa)    
Predicted Functional Partners:
KXA15958.1
Toxin-antitoxin system, toxin component, HicA family.
 
     0.931
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
       0.625
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
       0.616
KXA15955.1
Replicative DNA helicase; KEGG: gvg:HMPREF0421_20092 5.1e-244 dnaB; replicative DNA helicase DnaB K02314; Psort location: Cytoplasmic, score: 7.50.
     
 0.593
KXA15957.1
CobB/CobQ-like protein; KEGG: ssr:SALIVB_1273 1.1e-40 cobyric acid synthase K07009; Psort location: Cytoplasmic, score: 7.50.
       0.563
KXA15956.1
Mur ligase middle domain protein; KEGG: bbb:BIF_00786 2.9e-131 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Psort location: Cytoplasmic, score: 7.50.
       0.544
KXA15960.1
Hypothetical protein.
       0.441
KXA15961.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.441
KXA16394.1
Addiction module antitoxin, RelB/DinJ family.
 
  
 0.425
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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