STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15966.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (264 aa)    
Predicted Functional Partners:
KXA15874.1
KEGG: gvh:HMPREF9231_0061 1.1e-209 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 7.50.
      0.833
KXA16019.1
Hypothetical protein; KEGG: bde:BDP_1936 1.2e-82 thioredoxin domain-containing protein K05838; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.779
KXA15926.1
DNA polymerase III, beta subunit; KEGG: gvh:HMPREF9231_0002 9.1e-183 dnaN; DNA polymerase III subunit beta K02338; Psort location: Cytoplasmic, score: 9.67.
 
 
 
 0.745
KXA15323.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.738
KXA16662.1
Transcription factor WhiB.
  
     0.722
KXA16386.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.694
KXA16020.1
ATP synthase F0, A subunit; KEGG: gvh:HMPREF9231_0133 1.3e-144 atpB; ATP synthase F0 subunit A K02108; Psort location: CytoplasmicMembrane, score: 10.00.
       0.692
KXA16021.1
ATP synthase F0, C subunit; KEGG: gvh:HMPREF9231_0134 3.8e-33 atpE; ATP synthase F0 subunit C K02110; Psort location: CytoplasmicMembrane, score: 9.55.
       0.692
KXA16022.1
ATP synthase F0, B subunit; KEGG: gvh:HMPREF9231_0135 8.3e-86 atpF; ATP synthase F0 subunit B K02109; Psort location: CytoplasmicMembrane, score: 9.99.
       0.692
AtpH
ATP synthase F1, delta subunit; KEGG: gvg:HMPREF0421_20006 3.3e-98 atpH; ATP synthase F1 sector subunit delta K02113; Psort location: Cytoplasmic, score: 7.50.
       0.692
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.