STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15978.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
KXA15977.1
TadE-like protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.912
KXA15982.1
Type II/IV secretion system protein; KEGG: reh:H16_A0983 7.8e-42 cpaF3; flp pilus assembly ATPase CpaF K02283; Psort location: Cytoplasmic, score: 7.50.
       0.710
KXA15980.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.609
KXA16199.1
DNA topoisomerase I; KEGG: gvh:HMPREF9231_1284 0. topA; DNA topoisomerase I K03168; Psort location: Cytoplasmic, score: 9.67.
       0.597
KXA15981.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.571
KXA15976.1
KEGG: gvh:HMPREF9231_1326 2.1e-277 dnaX; DNA polymerase III, subunit gamma and tau K02343; Psort location: Cytoplasmic, score: 9.97.
       0.536
KXA15975.1
KEGG: apb:SAR116_1491 2.3e-35 recombination protein RecR K06187; Psort location: Cytoplasmic, score: 7.50.
       0.509
KXA15979.1
Hypothetical protein.
       0.447
KXA15983.1
Hypothetical protein; KEGG: msu:MS1486 0.0042 gumC; GumC protein; K00903 protein-tyrosine kinase; Psort location: Cytoplasmic, score: 7.50.
       0.400
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.