STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15985.1CrcB-like protein; KEGG: apb:SAR116_2418 0.0037 crcB protein K06199; Psort location: CytoplasmicMembrane, score: 10.00. (139 aa)    
Predicted Functional Partners:
KXA15986.1
CrcB-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.927
KXA15987.1
Adenylosuccinate synthase; KEGG: gvh:HMPREF9231_1337 4.6e-227 purA; adenylosuccinate synthase K01939; Psort location: Cytoplasmic, score: 9.97.
     
 0.868
KXA15946.1
KEGG: bbp:BBPR_1827 4.0e-77 protein-disulfide isomerase.
 
     0.687
KXA15984.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 3.0e-72 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.651
Pgm
KEGG: gva:HMPREF0424_0298 3.9e-301 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835; Psort location: Cytoplasmic, score: 7.50.
       0.637
KXA15443.1
KEGG: gvg:HMPREF0421_20721 4.7e-250 exopolyphosphatase family protein; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Psort location: Cytoplasmic, score: 9.97.
       0.633
KXA15615.1
ABC transporter, ATP-binding protein; KEGG: bbp:BBPR_0362 9.2e-158 ABC transporter permease K02049; Psort location: CytoplasmicMembrane, score: 9.96.
       0.543
KXA15988.1
Fructose-bisphosphate aldolase, class II; KEGG: gvg:HMPREF0421_20056 2.6e-178 fbaB; fructose-bisphosphate aldolase K01624.
     
 0.537
KXA15990.1
Transcriptional regulator, AsnC family; KEGG: apb:SAR116_0964 3.3e-11 proline dehydrogenase transcriptional activator K03719.
  
  
 0.467
KXA15967.1
Amino acid permease; KEGG: eci:UTI89_C0120 1.3e-64 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.466
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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