STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16008.1Pyridoxal phosphate enzyme, YggS family; KEGG: axy:AXYL_06119 3.6e-30 alanine racemase K06997; Psort location: Cytoplasmic, score: 7.50. (266 aa)    
Predicted Functional Partners:
KXA16011.1
Putative glutamyl-queuosine tRNA(Asp) synthetase; KEGG: gvh:HMPREF9231_1361 1.8e-177 tRNA ligase class I, catalytic domain protein; K01885 glutamyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.869
KXA16093.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.862
KXA16984.1
Hypothetical protein.
  
  
 0.833
KXA16983.1
YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.806
KXA17025.1
KEGG: gvh:HMPREF9231_1087 5.0e-198 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929; Psort location: Cytoplasmic, score: 9.97.
  
    0.761
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
  
    0.741
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
 
    0.712
KXA17024.1
KEGG: gvh:HMPREF9231_1086 2.5e-187 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.705
KXA17029.1
KEGG: gvh:HMPREF9231_1091 7.9e-152 mraW; S-adenosyl-methyltransferase MraW K03438; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.704
IleS
isoleucine--tRNA ligase; KEGG: gvh:HMPREF9231_1070 0. ileS; isoleucine--tRNA ligase K01870; Psort location: Cytoplasmic, score: 9.97.
     
 0.700
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.