STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16012.1Channel protein, MIP family; KEGG: hiq:CGSHiGG_06740 5.1e-22 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00. (236 aa)    
Predicted Functional Partners:
KXA15737.1
Cyclic nucleotide-binding domain protein; KEGG: bde:BDP_1802 3.4e-89 Crp family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
   
 0.890
KXA16092.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: gvg:HMPREF0421_20336 3.3e-146 aldo/keto reductase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.741
KXA15916.1
Protein phosphatase 2C; KEGG: gvg:HMPREF0421_20137 1.1e-259 protein phosphatase; K01090 protein phosphatase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.720
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
  
    0.671
KXA15532.1
KEGG: gvg:HMPREF0421_20626 4.0e-93 cypB; peptidyl-prolyl cis-trans isomerase K03767; Psort location: Cytoplasmic, score: 9.97.
   
 0.660
KXA16011.1
Putative glutamyl-queuosine tRNA(Asp) synthetase; KEGG: gvh:HMPREF9231_1361 1.8e-177 tRNA ligase class I, catalytic domain protein; K01885 glutamyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.640
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.602
KXA16963.1
Hypothetical protein; KEGG: bde:BDP_1099 2.7e-16 HAD-superfamily hydrolase, subfamily IA, variant 3; Psort location: Cytoplasmic, score: 7.50.
  
 0.583
KXA16237.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.2e-36 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.583
KXA15398.1
KEGG: bde:BDP_1099 1.2e-52 HAD-superfamily hydrolase, subfamily IA, variant 3; Psort location: Cytoplasmic, score: 7.50.
  
 0.583
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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