STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16055.1Hypothetical protein; KEGG: bbb:BIF_00011 3.1e-05 Sensory Transduction Protein Kinase; Psort location: CytoplasmicMembrane, score: 10.00. (390 aa)    
Predicted Functional Partners:
KXA16056.1
Transcriptional regulator, LuxR family; KEGG: bbp:BBPR_0809 5.5e-18 two-component transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.916
KXA15422.1
Prevent-host-death family protein; KEGG: bde:BDP_0818 5.3e-75 two-component response regulator; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.695
KXA16256.1
Response regulator receiver domain protein; KEGG: bbp:BBPR_0809 1.0e-25 two-component transcriptional regulator; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.625
KXA16052.1
Transcriptional regulator, LuxR family; KEGG: bbp:BBPR_0809 2.8e-21 two-component transcriptional regulator.
  
 
 0.625
KXA16057.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.574
KXA15912.1
Kinase domain protein; KEGG: gvh:HMPREF9231_0017 0. putative serine/threonine-protein kinase PrkC; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.514
KXA15421.1
KEGG: crd:CRES_0317 9.1e-64 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.404
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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