STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16066.1Putative opcA protein; Psort location: Cytoplasmic, score: 7.50. (334 aa)    
Predicted Functional Partners:
KXA16065.1
6-phosphogluconolactonase; KEGG: gvg:HMPREF0421_21328 1.1e-138 pgl; putative 6-phosphogluconolactonase K01057.
  
 0.995
KXA16067.1
KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.
  
 0.989
Tal
Transaldolase; KEGG: gvg:HMPREF0421_20790 4.6e-188 tal; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.795
Tkt
Transketolase; KEGG: gvg:HMPREF0421_20791 0. tkt; transketolase K00615; Psort location: Cytoplasmic, score: 7.50.
     
 0.768
Pgi
KEGG: gvh:HMPREF9231_0314 0. glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.67.
     
 0.651
KXA17468.1
KEGG: gvg:HMPREF0421_20299 2.0e-153 gnd; 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 7.50.
     
 0.646
KXA17464.1
Hypothetical protein; KEGG: ase:ACPL_4138 1.4e-31 2',3'-cyclic-nucleotide 2'-phosphodiesterase K06950; Psort location: Cytoplasmic, score: 7.50.
       0.645
KXA16268.1
KEGG: gvg:HMPREF0421_20231 6.7e-116 phosphoglycerate mutase K15634; Psort location: Cytoplasmic, score: 7.50.
     
 0.636
KXA16068.1
Acyltransferase; KEGG: bnm:BALAC2494_00792 3.4e-105 Acyltransferase transferring groups other than amino-acyl groups; Psort location: CytoplasmicMembrane, score: 10.00.
       0.634
KXA15166.1
Hypothetical protein; KEGG: ase:ACPL_3309 2.7e-09 Endo-1,4-beta-xylanase Z; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.617
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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