STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16068.1Acyltransferase; KEGG: bnm:BALAC2494_00792 3.4e-105 Acyltransferase transferring groups other than amino-acyl groups; Psort location: CytoplasmicMembrane, score: 10.00. (760 aa)    
Predicted Functional Partners:
KXA15305.1
KEGG: ccm:Ccan_01720 2.5e-45 protein mrp-like protein K03593.
     
 0.745
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
     
 0.703
KXA16097.1
3-deoxy-7-phosphoheptulonate synthase; KEGG: gvg:HMPREF0421_20347 1.3e-197 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626; Psort location: Cytoplasmic, score: 7.50.
       0.675
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
       0.670
Prs
KEGG: gvh:HMPREF9231_0708 4.8e-177 prs_2; ribose-phosphate diphosphokinase K00948; Psort location: Cytoplasmic, score: 9.97.
       0.642
KXA16380.1
Ribosomal protein S16; KEGG: apb:SAR116_1817 1.1e-19 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.97.
       0.639
AckA
Acetate kinase; KEGG: gvg:HMPREF0421_20574 6.8e-217 ackA; acetate kinase K00925; Psort location: Cytoplasmic, score: 9.97.
       0.634
KXA16066.1
Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.
       0.634
KXA16067.1
KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.
       0.634
KXA16378.1
KEGG: apb:SAR116_1818 3.8e-07 16S rRNA processing protein K02860; Psort location: Cytoplasmic, score: 7.50.
       0.615
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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