STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16078.1Hypothetical protein; KEGG: gvh:HMPREF9231_0205 7.8e-58 macrophage migration inhibitory factor. (115 aa)    
Predicted Functional Partners:
KXA16079.1
GtrA-like protein; KEGG: dly:Dehly_0597 0.00040 dolichyl-phosphate beta-D-mannosyltransferase K00721; Psort location: CytoplasmicMembrane, score: 10.00.
       0.839
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.636
KXA16080.1
KEGG: gvg:HMPREF0421_21309 1.1e-108 phosphoglycerate mutase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.590
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
       0.549
KXA15718.1
Riboflavin kinase; KEGG: gvg:HMPREF0421_20346 6.3e-191 ribF; riboflavin kinase/FMN adenylyltransferase K11753; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.525
GltX
glutamate--tRNA ligase; KEGG: gvh:HMPREF9231_0209 6.5e-276 gltX; glutamate--tRNA ligase K01885; Psort location: Cytoplasmic, score: 9.97.
   
   0.517
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
     
 0.512
KXA15734.1
ErfK/YbiS/YcfS/YnhG; KEGG: paw:PAZ_c23670 0.00040 putative L,D-transpeptidase.
 
    0.476
KXA15275.1
KEGG: ccm:Ccan_13160 1.5e-57 ABC transporter ATP-binding protein ydiF K06158; Psort location: Cytoplasmic, score: 9.95.
 
   0.468
KXA17259.1
KEGG: apb:SAR116_0691 6.3e-17 Sua5/YciO/YrdC/YwlC family protein K07566; Psort location: Cytoplasmic, score: 7.50.
     
 0.454
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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