STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16091.1Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; KEGG: gvg:HMPREF0421_20335 0. pnp; polyribonucleotide nucleotidyltransferase K00962; Psort location: Cytoplasmic, score: 9.97. (919 aa)    
Predicted Functional Partners:
KXA16311.1
KEGG: gvg:HMPREF0421_20320 0. cafA; Rne/Rng family ribonuclease; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 9.95.
  
 0.986
KXA16089.1
Ribosomal protein S15; KEGG: apb:SAR116_1577 1.1e-19 30S ribosomal protein S15 K02956; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.951
KXA17048.1
DEAD/DEAH box helicase; KEGG: gvg:HMPREF0421_20422 3.3e-256 ppx; exopolyphosphatase; Psort location: Cytoplasmic, score: 9.97.
  
 0.945
KXA15610.1
KEGG: gvg:HMPREF0421_20397 8.5e-132 rph; tRNA nucleotidyltransferase K00989; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.903
KXA15717.1
KEGG: gvh:HMPREF9231_1209 2.3e-154 truB; tRNA pseudouridine synthase B K03177; Psort location: Cytoplasmic, score: 9.97.
  
 0.902
KXA16849.1
Hypothetical protein; KEGG: gvg:HMPREF0421_21191 0. metallo-beta-lactamase; K12574 ribonuclease J; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.891
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.879
KXA15716.1
Ribosome-binding factor A; KEGG: aly:ARALYDRAFT_353351 8.0e-06 hypothetical protein; K00764 amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.875
KXA15941.1
tRNA adenylyltransferase; KEGG: gvg:HMPREF0421_20113 2.9e-250 pcnA; RNA nucleotidyltransferase; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.866
Eno
Phosphopyruvate hydratase; KEGG: gvg:HMPREF0421_20718 5.9e-227 eno; enolase K01689; Psort location: Cytoplasmic, score: 9.97.
  
 0.842
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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