STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16094.1KEGG: gvg:HMPREF0421_20338 1.3e-96 pcp; pyroglutamyl-peptidase I; K01304 pyroglutamyl-peptidase; Psort location: Cytoplasmic, score: 9.67. (227 aa)    
Predicted Functional Partners:
KXA16093.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.871
KXA16095.1
Hypothetical protein; KEGG: lif:LINJ_16_1550 4.0e-16 putative kinesin; Psort location: Cellwall, score: 8.97.
     
 0.779
KXA16096.1
KEGG: gvg:HMPREF0421_20340 2.2e-234 putative bleomycin hydrolase K01372; Psort location: Cytoplasmic, score: 9.97.
     
 0.755
KXA16092.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: gvg:HMPREF0421_20336 3.3e-146 aldo/keto reductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.681
KXA17144.1
LemA family protein; Psort location: Cytoplasmic, score: 7.50.
       0.511
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.