STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16097.13-deoxy-7-phosphoheptulonate synthase; KEGG: gvg:HMPREF0421_20347 1.3e-197 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626; Psort location: Cytoplasmic, score: 7.50. (394 aa)    
Predicted Functional Partners:
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.937
KXA16401.1
Prephenate dehydrogenase; KEGG: gvg:HMPREF0421_21121 7.3e-165 tyrA; prephenate dehydrogenase K04517; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.814
KXA16400.1
Prephenate dehydratase; KEGG: gvh:HMPREF9231_0415 6.7e-171 prephenate dehydratase K14170; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.812
KXA15255.1
Shikimate dehydrogenase substrate binding domain protein; KEGG: gvg:HMPREF0421_20764 1.3e-183 aroE; shikimate dehydrogenase K00014; Psort location: Cytoplasmic, score: 7.50.
     
 0.755
KXA15829.1
MTA/SAH nucleosidase; KEGG: gvh:HMPREF9231_1204 2.2e-117 mtnN; MTA/SAH nucleosidase K01243; Psort location: Cytoplasmic, score: 7.50.
  
    0.707
KXA15830.1
KEGG: bde:BDP_0387 4.3e-128 pstS; phosphate-binding protein K02040.
     
 0.695
KXA16096.1
KEGG: gvg:HMPREF0421_20340 2.2e-234 putative bleomycin hydrolase K01372; Psort location: Cytoplasmic, score: 9.97.
     
 0.682
KXA16095.1
Hypothetical protein; KEGG: lif:LINJ_16_1550 4.0e-16 putative kinesin; Psort location: Cellwall, score: 8.97.
       0.678
KXA16068.1
Acyltransferase; KEGG: bnm:BALAC2494_00792 3.4e-105 Acyltransferase transferring groups other than amino-acyl groups; Psort location: CytoplasmicMembrane, score: 10.00.
       0.675
KXA15832.1
KEGG: ebe:B21_03554 6.7e-36 pstA; pstA, subunit of phosphate ABC transporter K02038; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.673
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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