STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15841.1Ribosomal protein L11; KEGG: pmj:P9211_02221 4.2e-43 rplK; 50S ribosomal protein L11 K02867; Psort location: Cytoplasmic, score: 9.97. (143 aa)    
Predicted Functional Partners:
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
    0.999
KXA16444.1
Ribosomal protein S6; KEGG: apb:SAR116_0642 8.8e-11 30S ribosomal protein S6 K02990; Psort location: Cytoplasmic, score: 9.67.
  
 0.999
KXA16341.1
Transcription termination/antitermination factor NusG; KEGG: apb:SAR116_2379 3.4e-25 transcription antiterminator K02601; Psort location: Cytoplasmic, score: 7.50.
 
 0.999
RplJ
Ribosomal protein L10; KEGG: apb:SAR116_2382 8.6e-20 50S ribosomal protein L10 K02864; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.999
KXA15838.1
Ribosomal protein L7/L12; KEGG: apb:SAR116_2383 5.0e-24 50S ribosomal protein L7/L12 K02935; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
RplA
Ribosomal protein L1; KEGG: apb:SAR116_2381 2.9e-58 50S ribosomal protein L1 K02863; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
RplC
KEGG: apb:SAR116_2391 1.6e-43 50S ribosomal protein L3 K02906; Psort location: Cytoplasmic, score: 9.67.
  
 0.999
RplR
KEGG: apb:SAR116_2407 5.1e-15 50S ribosomal protein L18 K02881; Psort location: Cytoplasmic, score: 9.67.
  
 0.999
KXA15705.1
KEGG: bcz:BCZK0127 9.0e-25 infA; translation initiation factor IF-1 K02518; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.999
KXA17226.1
KEGG: mct:MCR_1603 8.9e-18 rplY; 50S ribosomal protein L25 K02897; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.998
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.