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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15671.1KEGG: gvh:HMPREF9231_0230 4.2e-194 ImpB/MucB/SamB family protein; K02346 DNA polymerase IV; Psort location: Cytoplasmic, score: 7.50. (443 aa)    
Predicted Functional Partners:
KXA15926.1
DNA polymerase III, beta subunit; KEGG: gvh:HMPREF9231_0002 9.1e-183 dnaN; DNA polymerase III subunit beta K02338; Psort location: Cytoplasmic, score: 9.67.
  
 0.999
KXA17035.1
Repressor LexA; KEGG: gvg:HMPREF0421_20459 1.4e-115 lexA; repressor lexA K01356; Psort location: Cytoplasmic, score: 7.50.
 
 0.987
KXA15154.1
RecA protein; KEGG: jde:Jden_1041 1.7e-135 recA protein K03553; Psort location: Cytoplasmic, score: 9.97.
  
 0.970
KXA17072.1
KEGG: gvh:HMPREF9231_0991 0. polA; DNA-directed DNA polymerase K02335; Psort location: Cytoplasmic, score: 7.50.
  
 0.945
KXA16979.1
DNA polymerase III, alpha subunit; KEGG: gvg:HMPREF0421_20519 0. dnaE; DNA-directed DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.841
KXA15672.1
Putative membrane protein; KEGG: pfe:PSF113_1815 1.4e-19 integral membrane protein K11939; Psort location: CytoplasmicMembrane, score: 10.00.
       0.823
KXA17022.1
KEGG: kfl:Kfla_2886 8.3e-54 cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.808
KXA16199.1
DNA topoisomerase I; KEGG: gvh:HMPREF9231_1284 0. topA; DNA topoisomerase I K03168; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.806
KXA15915.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: cgo:Corgl_1656 3.5e-71 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.785
KXA17037.1
Putative FK506-binding protein; KEGG: gvg:HMPREF0421_20457 1.6e-66 fkbP; peptidyl-prolyl cis-trans isomerase.
   
 
 0.717
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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