STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15672.1Putative membrane protein; KEGG: pfe:PSF113_1815 1.4e-19 integral membrane protein K11939; Psort location: CytoplasmicMembrane, score: 10.00. (312 aa)    
Predicted Functional Partners:
KXA15671.1
KEGG: gvh:HMPREF9231_0230 4.2e-194 ImpB/MucB/SamB family protein; K02346 DNA polymerase IV; Psort location: Cytoplasmic, score: 7.50.
       0.823
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
       0.692
IleS
isoleucine--tRNA ligase; KEGG: gvh:HMPREF9231_1070 0. ileS; isoleucine--tRNA ligase K01870; Psort location: Cytoplasmic, score: 9.97.
       0.639
KXA16008.1
Pyridoxal phosphate enzyme, YggS family; KEGG: axy:AXYL_06119 3.6e-30 alanine racemase K06997; Psort location: Cytoplasmic, score: 7.50.
       0.628
KXA16859.1
YbaK/EbsC protein; KEGG: ent:Ent638_0960 4.1e-29 hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.627
KXA15676.1
YigZ family protein; KEGG: gvg:HMPREF0421_21290 3.4e-89 IMPACT family protein; Psort location: Cytoplasmic, score: 7.50.
       0.625
KXA16808.1
Carbamoyl-phosphate synthase L chain, ATP binding domain protein; KEGG: gvg:HMPREF0421_21230 0. bccA; biotin carboxylase K11263; Psort location: Cytoplasmic, score: 7.50.
       0.621
KXA16700.1
FemAB family protein; KEGG: eat:EAT1b_2964 5.7e-27 Methicillin resistance protein; K11693 peptidoglycan pentaglycine glycine transferase (the first glycine); Psort location: Cytoplasmic, score: 7.50.
       0.561
KXA16809.1
Carboxyl transferase domain protein; KEGG: gvg:HMPREF0421_21229 1.2e-281 pccB; propionyl-CoA carboxylase; Psort location: Cytoplasmic, score: 7.50.
       0.465
KXA16983.1
YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.404
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.