STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15675.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (97 aa)    
Predicted Functional Partners:
KXA15674.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.648
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
     
 0.611
KXA15676.1
YigZ family protein; KEGG: gvg:HMPREF0421_21290 3.4e-89 IMPACT family protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.601
KXA15673.1
Hypothetical protein; KEGG: ase:ACPL_2000 3.9e-10 Triple functional domain protein; Psort location: Cellwall, score: 9.21.
     
 0.587
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
       0.558
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
       0.535
KXA16648.1
Cation diffusion facilitator family transporter; KEGG: eci:UTI89_C0749 7.7e-35 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.520
KXA16019.1
Hypothetical protein; KEGG: bde:BDP_1936 1.2e-82 thioredoxin domain-containing protein K05838; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.456
AspS
aspartate--tRNA ligase; KEGG: gvg:HMPREF0421_20832 0. aspS; aspartate--tRNA ligase K01876; Psort location: Cytoplasmic, score: 10.00.
 
     0.441
KXA15186.1
KEGG: gvh:HMPREF9231_0908 1.4e-248 putative adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
   
   0.433
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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