STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15682.1KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97. (901 aa)    
Predicted Functional Partners:
KXA15335.1
Alcohol dehydrogenase, propanol-preferring; KEGG: gvg:HMPREF0421_20841 1.6e-178 adhP; alcohol dehydrogenase K13953; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.934
KXA16424.1
HTH domain protein; KEGG: ova:OBV_10270 6.3e-56 pscK; pseudouridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.925
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.897
PflA
KEGG: gvh:HMPREF9231_0918 3.0e-159 pflA; pyruvate formate-lyase activating enzyme K04069; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.865
KXA16007.1
FAH family protein; KEGG: gvg:HMPREF0421_20078 2.0e-139 fahA; fumarylacetoacetate hydrolase.
  
 
 0.853
Tal
Transaldolase; KEGG: gvg:HMPREF0421_20790 4.6e-188 tal; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.847
PflB
KEGG: gvg:HMPREF0421_20633 0. pflB; formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.846
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
     
 0.843
KXA17602.1
Hypothetical protein; KEGG: ase:ACPL_6362 3.9e-24 Replicase polyprotein 1ab; Psort location: Cytoplasmic, score: 7.50.
  
 0.841
KXA17146.1
Hypothetical protein; KEGG: ssr:SALIVB_0977 6.2e-49 signal transduction histidine kinase, LytS; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.841
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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