STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15703.1KEGG: apb:SAR116_2411 2.0e-82 preprotein translocase subunit SecY K03076; Psort location: CytoplasmicMembrane, score: 10.00. (446 aa)    
Predicted Functional Partners:
KXA15700.1
Ribosomal protein S5; KEGG: apb:SAR116_2408 1.1e-35 30S ribosomal protein S5 K02988; Psort location: Cytoplasmic, score: 9.97.
 0.999
RpsH
Ribosomal protein S8; KEGG: apb:SAR116_2405 5.5e-25 30S ribosomal protein S8 K02994; Psort location: Cytoplasmic, score: 9.97.
 
 0.998
KXA15698.1
Ribosomal protein L6; KEGG: ccv:CCV52592_1018 3.3e-34 rplF; 50S ribosomal protein L6 K02933; Psort location: Cytoplasmic, score: 7.50.
 
 0.998
KXA17595.1
KEGG: pen:PSEEN4477 3.8e-207 secA, azi, div; preprotein translocase subunit SecA K03070; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.996
RplE
Ribosomal protein L5; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.996
RplR
KEGG: apb:SAR116_2407 5.1e-15 50S ribosomal protein L18 K02881; Psort location: Cytoplasmic, score: 9.67.
 
 
 0.996
KXA15702.1
Ribosomal protein L15; KEGG: apb:SAR116_2410 9.9e-19 50S ribosomal protein L15 K02876.
 
 
 0.996
KXA15701.1
Ribosomal protein L30; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.995
RpsK
KEGG: apb:SAR116_2414 5.7e-39 30S ribosomal protein S11 K02948; Psort location: Cytoplasmic, score: 9.67.
 
 0.995
RplW
Ribosomal protein L23; KEGG: apb:SAR116_2393 3.5e-16 50S ribosomal protein L25 K02892; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.994
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.