STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15705.1KEGG: bcz:BCZK0127 9.0e-25 infA; translation initiation factor IF-1 K02518; Psort location: Cytoplasmic, score: 9.97. (85 aa)    
Predicted Functional Partners:
KXA17037.1
Putative FK506-binding protein; KEGG: gvg:HMPREF0421_20457 1.6e-66 fkbP; peptidyl-prolyl cis-trans isomerase.
  
 
 0.999
RplJ
Ribosomal protein L10; KEGG: apb:SAR116_2382 8.6e-20 50S ribosomal protein L10 K02864; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.999
KXA15841.1
Ribosomal protein L11; KEGG: pmj:P9211_02221 4.2e-43 rplK; 50S ribosomal protein L11 K02867; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.999
RplA
Ribosomal protein L1; KEGG: apb:SAR116_2381 2.9e-58 50S ribosomal protein L1 K02863; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.999
RplC
KEGG: apb:SAR116_2391 1.6e-43 50S ribosomal protein L3 K02906; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.999
RplW
Ribosomal protein L23; KEGG: apb:SAR116_2393 3.5e-16 50S ribosomal protein L25 K02892; Psort location: Cytoplasmic, score: 9.67.
  
 
  0.999
RplB
Ribosomal protein L2; KEGG: apb:SAR116_2394 2.0e-75 50S ribosomal protein L2 K02886; Psort location: Cytoplasmic, score: 7.50.
  
 0.999
KXA15688.1
Ribosomal protein S19; KEGG: apb:SAR116_2395 1.0e-25 30S ribosomal protein S19 K02965; Psort location: Cytoplasmic, score: 9.67.
  
 0.999
RplV
Ribosomal protein L22; KEGG: apb:SAR116_2396 1.0e-16 50S ribosomal protein L22 K02890; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.999
KXA15690.1
Ribosomal protein S3; KEGG: apb:SAR116_2397 5.1e-54 30S ribosomal protein S3 K02982; Psort location: Cytoplasmic, score: 9.97.
  
 0.999
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.