STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15711.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (428 aa)    
Predicted Functional Partners:
KXA15712.1
KEGG: gvg:HMPREF0421_21255 1.3e-135 truA; tRNA-pseudouridine synthase I K06173; Psort location: Cytoplasmic, score: 7.50.
       0.666
KXA15208.1
Hypothetical protein; KEGG: bbb:BIF_01130 8.7e-43 Acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
    0.539
KXA16280.1
ABC transporter, permease protein; KEGG: cpy:Cphy_1880 1.6e-107 fructose-bisphosphate aldolase K10109; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.529
KXA16079.1
GtrA-like protein; KEGG: dly:Dehly_0597 0.00040 dolichyl-phosphate beta-D-mannosyltransferase K00721; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.508
KXA16281.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 1.1e-26 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: Extracellular, score: 9.13.
 
   
 0.492
RplQ
Ribosomal protein L17; KEGG: apb:SAR116_2416 1.9e-22 50S ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.67.
       0.486
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
  
    0.464
KXA15908.1
Hypothetical protein; KEGG: bbb:BIF_01564 3.8e-81 Methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.435
KXA15734.1
ErfK/YbiS/YcfS/YnhG; KEGG: paw:PAZ_c23670 0.00040 putative L,D-transpeptidase.
 
     0.410
KXA17139.1
YhgE/Pip domain protein; KEGG: pkn:PKH_142780 3.5e-08 dihydropteroate synthase; K00796 dihydropteroate synthase K00950; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.409
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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